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It is possible to change the labels of the classes and their properties, and the order of properties.
Click on "Browse unit metadata" on the panel corresponding to a persistence unit to get a tree of the classes/properties of the data model.
Fields on the right can be used to change label/order of the selected object in the tree.
NOTE: this look'n feel is not very friendly, it is going to be improved in upcoming version.

On the panel for performing custom queries, you can either save/load bookmarks using the corresponding buttons.
When saving a bookmark, the user is asked to input a short description and a name/id (NOTE: the name will be removed from upcoming versions).
A list of all the bookmarks is available by selecting "Perform a bookmarked query" on the panel related to a persistence unit, or by clicking on the "Use bookmark" toolbar icon.
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